Spatial Analysis and Modelling


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Documentation for package ‘spatialEco’ version 0.1-7

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ants Ant Biodiversity Data
bearing.distance Bearing and Distance
breeding.density Breeding density areas (aka, core habitat areas)
concordance Concordance test for binomial models
conf.interval Confidence interval for mean or median
correlogram Correlogram
csi Cosine Similarity Index
curvature Surface curvature
daymet.point DAYMET point values
daymet.tiles DAYMET Tile ID's
DAYMET_tiles DAYMET climate tile index
dispersion Dispersion (H-prime)
dissection Dissection
download.daymet Download DAYMET
download.hansen Download Hansen Forest 2000-2013 Change
download.prism Download PRISM
effect.size Cohen's-d effect size
elev Elevation raster
gaussian.kernel Gaussian Kernel
group.pdf Probability density plot by group
hexagons Hexagons
hli Heat Load Index
hmwCorr Dutilleul moving window bivariate raster correlation
hsp Hierarchical Slope Position
idw.smoothing idw.smoothing
insert.values Insert Values
kde2D 2-dimensional kernel density estimate
kl.divergence Kullback-Leibler divergence (relative entropy)
land.metrics Landscape metrics for points and polygons
local.min.max Local minimum and maximum
loess.boot Loess Bootstrap
loess.ci Loess with confidence intervals
logistic.regression Logistic and Auto-logistic regression
moments moments
nni Average Nearest Neighbour Index (NNI)
o.ring Inhomogeneous O-ring
optimal.k optimalK
outliers Outliers
parea.sample Percent area sample
plot.effect.size Plot effect size
plot.loess.boot Plot Loess Bootstrap
point.in.poly Point and Polygon Intersect
polyPerimeter Polygon perimeter
pp.subsample Point process random subsample
print.effect.size Print effect size
print.loess.boot Print Loess bootstrap model
pseudo.absence Pseudo-absence random samples
pu Biodiversity Planning Units
raster.deviation Raster local deviation from the global trend
raster.entropy Raster Entropy
raster.gaussian.smooth Gaussian smoothing of raster
raster.invert Invert raster
raster.mds Raster multidimensional scaling (MDS)
raster.moments Raster moments
raster.transformation Statistical transformation for rasters
raster.vol Raster Percent Volume
raster.Zscore Modified z-score for a raster
rasterCorrelation Raster correlation
sa.trans Trigonomic transformation of a slope and aspect interaction
sample.annulus Sample annulus
sample.line Systematic or random point sample of line(s)
sample.poly Sample Polygons
sampleTransect Sample transect
sar Surface Area Ratio
se.news spatialEco news
separability separability
shannons Shannon's Diversity (Entropy) Index
similarity Ecological similarity
sobal Sobel-Feldman operator
sp.na.omit sp na.omit
srr Surface Relief Ratio
stratified.random Stratified random sample
summary.effect.size Summarizing effect size
summary.loess.boot Summarizing Loess bootstrap models
tpi Topographic Position Index (tpi)
trasp Solar-radiation Aspect Index
trend.line trend.line
tri Terrain Ruggedness Index
vrm Vector Ruggedness Measure (VRM)
wt.centroid Weighted centroid
zonal.stats zonal.stats