Quality Control of Sequencing Data

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Documentation for package ‘fastqcr’ version 0.1.0

Help Pages

fastqc Run FastQC Tool
fastqc_install Install FastQC Tool
print.qctable Plot FastQC Results
qc_aggregate Aggregate FastQC Reports for Multiple Samples
qc_fails Inspect Problems in Aggregated FastQC Reports
qc_plot Plot FastQC Results
qc_problems Inspect Problems in Aggregated FastQC Reports
qc_read Read FastQC Data
qc_report Build a QC Report
qc_stats Aggregate FastQC Reports for Multiple Samples
qc_unzip Unzip Files in the FastQC Result Directory
qc_warns Inspect Problems in Aggregated FastQC Reports
summary.qc_aggregate Aggregate FastQC Reports for Multiple Samples