Age-Depth Modelling using Bayesian Statistics

Documentation for package ‘rbacon’ version 2.3.1.2

rbacon-package	rbacon
accrate.age	Obtain estimated accumulation rates for any age of a core.
accrate.age.ghost	Plot a core's accumulation rates against calendar time.
accrate.depth	Obtain estimated accumulation rates as for any depth of a core.
accrate.depth.ghost	Plot modelled accumulation rates against the depths of a core.
add.date	Add dates to age-depth plots
age.pMC	Calculate pMC values from C14 ages
agedepth	Plot an age-depth model
AgesOfEvents	Event probabilities against calendar age
Bacon	Main age-depth modelling function
Bacon.Age.d	Output all ages for a single depth.
Bacon.cleanup	Remove files made to produce the current core's age-depth model.
Bacon.hist	Calculate age distributions of depths.
Baconvergence	Test to identify poorly mixed MCMC runs.
Bacon_runs	List the folders present in the current core directory.
calib.plot	Plot the dates
copyCalibrationCurve	Copy a calibration curve.
flux.age.ghost	Plot flux rates for proxies.
mix.curves	Build a custom-made, mixed calibration curve.
pMC.age	Calculate C14 ages from pmC values.
proxy.ghost	Proxies analysed along the depths of a core can be plotted as 'proxy-ghost' graphs against calendar time while taking into account chronological uncertainties. Here darker grey indicates more likely calendar ages for specific proxy values.
rbacon	rbacon
scissors	Remove the first n iterations.
thinner	Thin iterations by given proportion, for example if autocorrelation is visible within the MCMC series, and then update the output file.