Hierarchical Bayesian Modeling of Decision-Making Tasks


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Documentation for package ‘hBayesDM’ version 0.5.0

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hBayesDM-package Hierarchical Bayesian Modeling of Decision-Making Tasks
bandit2arm_delta Two-Arm Bandit Task
bandit4arm_4par 4-armed bandit task
bandit4arm_lapse 4-armed bandit task
choiceRT_ddm Choice Reaction Time task, drift diffusion modeling
choiceRT_ddm_single Choice Reaction Time task, drift diffusion modeling
choiceRT_lba Choice Reaction Time task, linear ballistic accumulator modeling
choiceRT_lba_single Choice Reaction Time task, linear ballistic accumulator modeling
dd_cs Delay Discounting Task
dd_cs_single Delay Discounting Task (Ebert & Prelec, 2007)
dd_exp Delay Discounting Task
dd_hyperbolic Delay Discounting Task
dd_hyperbolic_single Delay Discounting Task (Ebert & Prelec, 2007)
estimate_mode Function to estimate mode of MCMC samples
extract_ic Extract Model Comparison Estimates
gng_m1 Orthogonalized Go/Nogo Task
gng_m2 Orthogonalized Go/Nogo Task
gng_m3 Orthogonalized Go/Nogo Task
gng_m4 Orthogonalized Go/Nogo Task
hBayesDM Hierarchical Bayesian Modeling of Decision-Making Tasks
HDIofMCMC Compute Highest-Density Interval
igt_pvl_decay Iowa Gambling Task
igt_pvl_delta Iowa Gambling Task (Ahn et al., 2008)
igt_vpp Iowa Gambling Task
multiplot Function to plot multiple figures
peer_ocu Peer influence task (Chung et al., 2015 Nature Neuroscience)
plot.hBayesDM General Purpose Plotting for hBayesDM. This function plots hyper parameters.
plotDist Plots the histogram of MCMC samples.
plotHDI Plots highest density interval (HDI) from (MCMC) samples and prints HDI in the R console. HDI is indicated by a red line.
plotInd Plots individual posterior distributions, using the stan_plot function of the rstan package
printFit Print model-fits (mean LOOIC and WAIC values) of hBayesDM Models
prl_ewa Probabilistic Reversal Learning Task
prl_fictitious Probabilistic Reversal Learning Task
prl_fictitious_multipleB Probabilistic Reversal Learning Task (Glascher et al, 2009), multiple blocks per subject
prl_fictitious_rp Probabilistic Reversal Learning Task
prl_rp Probabilistic Reversal Learning Task
prl_rp_multipleB Probabilistic Reversal Learning Task, multiple blocks per subject
ra_noLA Risk Aversion Task
ra_noRA Risk Aversion Task
ra_prospect Risk Aversion Task
rhat Function for extracting Rhat values from an hBayesDM object
ug_bayes Norm-Training Ultimatum Game
ug_delta Norm-Training Ultimatum Game