The R Version of WebGestalt


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Documentation for package ‘WebGestaltR’ version 0.1.1

Help Pages

WebGestaltR-package The R version of WebGestalt
formatCheck Check the format of the uploaded gene list or ranked gene list file or object.
GOSlimSummary Summary the gene list based on the GO (Gene Ontology) Slim data sets
IDMapping ID Mapping
listArchiveURL List the server URL of each version of the data update
listGeneSet List gene sets
listIDType List ID type
listOrganism List organisms
listReferenceSet List reference set
readGMT Read GMT file
WebGestaltR Comprehensive R function for the enrichment analysis
WebGestaltR_batch Batch analysis for the multiple gene or ranked gene lists