Continuous-Time Movement Modeling


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Documentation for package ‘ctmm’ version 0.3.2

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ctmm-package Continuous-time movement modeling
akde Calculate an autocorrelated kernel density estimate
akde.bandwidth Calculate the optimal bandwidth matrix of movement data
as.telemetry Import, coerce, and summarize MoveBank data
as.telemetry.character Import, coerce, and summarize MoveBank data
as.telemetry.data.frame Import, coerce, and summarize MoveBank data
as.telemetry.Move Import, coerce, and summarize MoveBank data
buffalo African buffalo GPS dataset from Kruger National Park, South Africa.
ctmm Specify, fit, and select continuous-time movement models
ctmm.fit Specify, fit, and select continuous-time movement models
ctmm.guess Visually fit a movement model to a variogram
ctmm.loglike Specify, fit, and select continuous-time movement models
ctmm.select Specify, fit, and select continuous-time movement models
export Export ctmm data formats
gazelle Mongolian gazelle GPS dataset from the Mongolia's Eastern Steppe.
homerange Calculate a range distribution estimate
mean.variogram Compute a number-weighted average of variogram objects
occurrence Calculate a Kriged occurrence disribution estimate
overlap Calculate the overlap between two stationary distributions
overlap.ctmm Calculate the overlap between two stationary distributions
overlap.telemetry Calculate the overlap between two stationary distributions
periodogram Calculate the Lomb-Scargle periodogram of animal-tracking data
plot Plotting methods for telemetry objects.
plot.periodogram Calculate the Lomb-Scargle periodogram of animal-tracking data
plot.telemetry Plotting methods for telemetry objects.
plot.variogram Plotting methods for variogram objects.
raster-method Export ctmm data formats
simulate Simulate a continuous-time movement model
simulate.ctmm Simulate a continuous-time movement model
SpatialPoints.telemetry Export ctmm data formats
SpatialPolygonsDataFrame.UD Export ctmm data formats
summary.ctmm Summarize a continuous-time movement model
summary.telemetry Import, coerce, and summarize MoveBank data
summary.UD Summarize a range distribution
variogram Calculate an empirical variogram from movement data
variogram.fit Visually fit a movement model to a variogram
writeShapefile Export ctmm data formats
writeShapefile.UD Export ctmm data formats
zoom-method Plotting methods for telemetry objects.
zoom-method Plotting methods for variogram objects.