Principal Coordinates of Phylogenetic Structure

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Documentation for package ‘PCPS’ version 1.0.3

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define.clade Define clade
matrix.p.sig Association between phylogeny-weighted species composition and environmental predictors
pcoa.sig Significant dimensions in principal coordinate analysis
pcps Principal Coordinates of Phylogenetic Structure
pcps.curve Curve of phylogenetic signal at metacommunity level
pcps.sig Association between phylogeny-weighted species composition and environmental predictors
plot.pcps Principal Coordinates of Phylogenetic Structure
plot.pcpscurve Curve of phylogenetic signal at metacommunity level
print.pcoasig Significant dimensions in principal coordinate analysis
print.pcps Principal Coordinates of Phylogenetic Structure
print.pcpscurve Curve of phylogenetic signal at metacommunity level
scores.pcoasig Significant dimensions in principal coordinate analysis
scores.pcps Principal Coordinates of Phylogenetic Structure
self.belonging Degree of self belonging of species
summary.pcoasig Significant dimensions in principal coordinate analysis
summary.pcps Principal Coordinates of Phylogenetic Structure
summary.pcpscurve Curve of phylogenetic signal at metacommunity level