Perform Two-Way Orthogonal Partial Least Squares


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Documentation for package ‘OmicsPLS’ version 1.0.3

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OmicsPLS-package O2PLS: Two-Way Orthogonal Partial Least Squares
adjR2 Gridwise adjusted R2 for O2PLS
crossval_o2m Cross-validate procedure for O2PLS
crossval_o2m_adjR2 Adjusted Cross-validate procedure for O2PLS
loadings Extract the loadings from an O2PLS fit
loadings.o2m Extract the loadings from an O2PLS fit
loocv K fold CV for O2PLS
loocv_combi K-fold CV based on symmetrized prediction error
mse Calculate mean squared difference
o2m Perform O2-PLS with two-way orthogonal corrections
OmicsPLS O2PLS: Two-Way Orthogonal Partial Least Squares
orth Orthogonalize a matrix
plot.o2m Plot one or two loading vectors for class o2m
predict.o2m Predicts X or Y
print.cvo2m Cross-validate procedure for O2PLS
print.o2m Print function for O2PLS.
rmsep Root MSE of Prediction
rmsep_combi Symmetrized root MSE of Prediction
ssq Calculate Sum of Squares
summary.o2m Summary of an O2PLS fit
vnorm Norm of a vector or columns of a matrix