areaPermutation | Calculate Area Ratio of time intervals for all permutations |
curveFitting | Fit longitudinal data |
findSigInterval | Find Significant Time Intervals |
intervalArea | Calculate Area Ratio of time intervals |
metalonda | Metagenomic Longitudinal Differential Abundant Analysis for one feature |
metalondaAll | Metagenomic Longitudinal Differential Abundant Analysis for all features |
metalonda_test_data | Simulated data for OTU abundance for 2 phenotypes each has 5 subjects at 10-time points |
permutation | Permute group labels |
visualizeArea | Visualize significant time interval |
visualizeARHistogram | Visualize histogram of the Area Ratio |
visualizeFeature | Visualize Longitudinal Feature |
visualizeFeatureSpline | Visualize Feature with the fitted Splines |