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| treeplyr-package | treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects |
| anolis | Anole data |
| detectAllCharacters | Apply detectCharacterType over an entire matrix |
| detectCharacterType | Function to detect whether a character is continuous or discrete |
| filter.grouped_treedata | Function for filtering rows from an object of class 'treedata' |
| filter.treedata | Function for filtering rows from an object of class 'treedata' |
| filterMatrix | Filter a matrix, returning either all continuous or all discrete characters |
| filter_.grouped_treedata | Function for filtering rows from an object of class 'treedata' |
| filter_.treedata | Function for filtering rows from an object of class 'treedata' |
| forceFactor | Function for checking whether a treedata object contains only factors and for forcing data columns into factor format |
| forceNames | Force names for rows, columns, or both |
| forceNumeric | Function for checking whether a treedata object contains only numeric columns and for forcing data columns into numeric format |
| getVector | A function for returning a named vector from a data frame or matrix with row names |
| group_by.treedata | Function for grouping an object of class 'treedata' |
| group_by_.treedata | Function for grouping an object of class 'treedata' |
| hasNames | Row and column name check |
| make.treedata | Function for making an object of class 'treedata' |
| mutate.grouped_treedata | Function for mutating an object of class 'treedata' |
| mutate.treedata | Function for mutating an object of class 'treedata' |
| mutate_.grouped_treedata | Function for mutating an object of class 'treedata' |
| mutate_.treedata | Function for mutating an object of class 'treedata' |
| paint_clades | Add regimes to a treedata object |
| reorder | Reorder a 'treedata' object |
| reorder.treedata | Reorder a 'treedata' object |
| select.grouped_treedata | Function for selecting columns from an object of class 'treedata' |
| select.treedata | Function for selecting columns from an object of class 'treedata' |
| select_.grouped_treedata | Function for selecting columns from an object of class 'treedata' |
| select_.treedata | Function for selecting columns from an object of class 'treedata' |
| slice_.treedata | Choose rows by their ordinal position in the tbl for an object of class 'treedata' |
| summarise.grouped_treedata | Function for summarizing an object of class 'treedata' |
| summarise.treedata | Function for summarizing an object of class 'treedata' |
| summarize.grouped_treedata | Function for summarizing an object of class 'treedata' |
| summarize.treedata | Function for summarizing an object of class 'treedata' |
| tdapply | Apply a function over all treedata object columns and return a list of results, analogously to the normal apply function |
| treedply | Run a function on a 'treedata' object |
| treedply.treedata | Run a function on a 'treedata' object |
| treeply | Run a function on the phylogeny of a 'treedata' object |
| treeply.treedata | Run a function on the phylogeny of a 'treedata' object |
| treeplyr | treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects |
| ungroup.grouped_treedata | Function for grouping an object of class 'treedata' |