RSCABS-package | Runs the Rao-Scott adjusted Cochran-Armitage trend test by slices (RSCABS) analysis |
addHistoSpec | Specify data parameters |
checkPlot | Check the selection for plotting |
checkSelction | Checks user inputs |
convert2Score | Converts any object that is not zero or a positive number to NA |
detailedResults2HTML | Saves results as an HTML file |
detailedResults2Output | Print results to the GUI window |
exampleHistData | Example histology data |
filterData | Filters problematic data |
getDir | Attain the name of a directory |
Histopath | GUI for analysis of histopathological data |
openCB | Open a csv file |
otherPath | Other analyses for histopathological endpoints |
plotPath | Plot histopathological data |
plotRSCABS | Plots histopathological data. |
popMessage | Pops up a message |
prepDataRSCABS | Prepares data for an RSCABS analysis |
RSCABK | Runs the kth slice of RSCABS |
RSCABS | Runs the Rao-Scott adjusted Cochran-Armitage trend test by slices (RSCABS) analysis |
RSCABSMain | Cleans data and runs RSCABS when called from the GUI interface |
runDetailedResults | Attain detailed results on an endpoint |
runEffectSelect | Runs a detailed analysis on an endpoint |
runRSCABS | Runs RSCABS |
runStdSubset | Subset the data used in Histopath |
saveCB | Attain the name of a file to be saved |
saveFile | Saves a data set |
selectPara | Window to declare the names of variables and values |
setPlotParms | Sets the default plotting parameters for RSCABS |
stepDownRSCABS | Performs the step down aspect of RSCABS |
stepKRSCABS | Steps through the severity score for a given effect |
subsetDataKeep | Subsets data |