Bayesian Variant Selection: Bayesian Model Uncertainty Techniques for Genetic Association Studies

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Documentation for package ‘BVS’ version 4.12.1

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BVS-package Bayesian Variant Selection: Bayesian Model Uncertainty Techniques for Genetic Association Studies
BVS Bayesian Variant Selection: Bayesian Model Uncertainty Techniques for Genetic Association Studies
enumerateBVS Function to Enumerate all models for Bayesian Variant Selection Methods
fitBVS Function to calculate fitness for each model for Bayesian Variant Selection Methods
hapBVS Function to estimate and report a set of haplotypes given a subset of variants
InformBVS.I.out Example Output From 100K iterations of sampleBVS with Informative Data
InformBVS.NI.out Example Output From 100K iterations of sampleBVS with Informative Data
InformData PNAT Study-based Simulation: Informative Data.
Informresults.I Example Summary From 100K iterations of sampleBVS with Informative Data
Informresults.NI Example Summary From 100K iterations of sampleBVS with Informative Data
plotBVS Image Plots for top Variant and Region Inclusions
RareBVS.out Example Output From 100K iterations of sampleBVS with Rare Data
RareData Simulated Example Rare Variant data set.
RareResults Example Summary From 100K iterations of sampleBVS with Rare Data
sampleBVS Sampling Algorithm for Bayesian Variant Selection Methods
summaryBVS Calculates Posterior Summaries for BVS Methods