analyseNetwork | Analyze the network (graph) |
beatAML | beatAML |
drugComb | drugComb |
el2IncMatrix | Convert Edge list to Incidence Matrix |
extractSubMatrix | Extract the percentage-cut-off non-missing sub-matrices in a given matrix. |
findCluster | Find clusters in one-partite graph |
herbIngredient | herbIngredient |
imputeMissingValue | Impute the missing value in the given matrix. |
NIMAA | NIMAA: A package for Nominal Data Mining Analysis. |
plotBipartite | Plot the graph based on input data |
plotBipartiteInteractive | Use the incidence matrix to plot an interactive bipartite graph figure |
plotCluster | Plot the clusters in one projection of the bipartite graph. |
plotInput | Plot the given data with heatmap figure. |
robertson | robertson |
scoreCluster | Score the clusters in one projection of the bipartite graph. |
validateCluster | Validate the accuracy of our clustering of the projection comparing to users' input. |
validateImputation | Validate different imputation methods' result comparing to user's input. |
visualClusterInBipartite | Plot the bipartite graph with color coding for different cluster in different projections. |