Generalized Diffusion Magnetic Resonance Imaging


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Documentation for package ‘gdimap’ version 0.1-9

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gdimap-package Generalized Diffusion Magnetic Resonance Imaging
btable b-Table File for Shell Data
data A Real Dataset for Diffusion MRI Analysis
data.bval b-Table File
data.bvec 3D b-table Vectors for Data Acquisition
data_brain_mask Example of Mask File Used in Diffusion MRI Processing
data_gfa Generalized Fractional Anisotropy (GFA) File
data_V1 ODF First Principal Directions File
data_V2 ODF Second Principal Directions File
dec Directionally-Encoded Color (DEC) Representation
gqi.odfpeaklines Fibre Orientation Mapping Based on Local Peak Detection
gqi.odfpeaks Main Fibre Orientation Determination via Peak Detection with GQI Reconstruction
gqi.odfvmf Fibre Orientation Estimation Based on von Mises Distributions with GQI Reconstruction
gqi.odfvmflines Fibre Orientation Mapping Based on von Mises-Fisher Distributions with GQI Reconstruction
gqi.odfvxgrid Glyph Maps
niinorm Normalization of Principal Diffusion Directions
plotglyph 3D Glyph Visualization
rgbvolmap Generalized Fractional Anisotropy (GFA) Maps (RGB Maps)
s2tessel.zorder 3D Shell Grid Tessellation
simul.fandtasia Simulation of Curved Fibre Bundles for von Mises-Fisher Fibre Orientation Mapping
simul.fandtasiaSignal Simulation of Crossing-Fibre Diffusion Profiles
simul.simplefield Simulation of a Simple Field of Diffusion Profiles for von Mises-Fisher Fibre Orientation Mapping
simulglyph.vmf Voxel Diffusion Profile Simulation and von Mises-Fisher Fibre Mapping
slfcst A Region-of-Interest (ROI) File for Diffusion MRI Analysis
sph.odfpeaklines Fibre Orientation Mapping Based on Local Peak Detection with QBI Reconstruction
sph.odfpeaks Main Fibre Orientation Determination via Peak Detection with Q-ball Reconstruction
sph.odfvmf Fibre Orientation Estimation Based on von Mises Distributions with Q-ball Reconstruction
sph.odfvmflines Fibre Orientation Mapping Based on von Mises-Fisher Distributions with QBI reconstruction
sph.odfvxgrid Glyph Maps
synthfiberss2z Voxel Diffusion Profiles for Multiple Fibre Simulation