Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Helper Tool

Documentation for package ‘PCRedux’ version 0.2.6-4

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PCRedux-package	PCRedux - quantitative PCR Data Mining and Machine Learning Helper Tool
autocorrelation_test	A function to test for autocorrelation of amplification curve data from a quantitative PCR experiment
data_sample	The datasets implemented in PCRedux
decision_modus	A function to get a decision (modus) from a vector of classes
earlyreg	A function to calculate the slope and intercept of an amplification curve data from a quantitative PCR experiment.
encu	A function to calculate numerous features from amplification curve data from a quantitative PCR experiment.
head2tailratio	A function to calculate to head to tail ratio of amplification curve data from a quantitative PCR experiment
hookreg	A function to calculate the slope and intercept of an amplification curve data from a quantitative PCR experiment at the end of the data stream.
hookregNL	hookregNL - A function to calculate the slope of amplification curves in the tail region
l4	PCRedux - quantitative PCR Data Mining and Machine Learning Helper Tool
mblrr	A function to perform a Qunantile-filter based Local Robust Regression
PCRedux	PCRedux - quantitative PCR Data Mining and Machine Learning Helper Tool
pcrfit_single	pcrfit_single - A function to extract features from an amplification curve
performeR	Performance analysis for binary classification
qPCR2fdata	A helper function to convert amplification curve data to the fdata format.
RAS002	The datasets implemented in PCRedux
RAS002_decisions	The datasets implemented in PCRedux
tReem	A function to Group Amplification Curves According to their Shape
visdat_pcrfit	Visualizing the content of data from an analysis with the pcrfit_single function