Corbi-package | Corbi - Collection of Rudimentary Bioinformatics Tools |
best_subnets | The best subnetworks |
column | Extract a column from a matrix |
Corbi | Corbi - Collection of Rudimentary Bioinformatics Tools |
extend_subnets | Extend subnetworks from smaller subnetworks |
get_shortest_distances | Calculate shortest distances of unweighted network |
get_subnets | All subnetworks of limited size |
kappa_score | Cohen's kappa score |
markrank | MarkRank |
net_align | Network alignment method based on conditional random fields |
net_query | Network querying method based on conditional random fields |
net_query_batch | Network querying method based on conditional random fields |
nnzero | The number of non-zero values of a submatrix |
pmultihyper | The Multivariate Hypergeometric Distribution |
pmultinom | The Multinomial Distribution |
read_net | Read network information from text file |
rmultihyper | The Multivariate Hypergeometric Distribution |
submatrix | Extract a submatrix from a matrix |
write_net | Write network information to text file |